Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3759970_3760595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3759970 - 3760595

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

GTCCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGAAAA

U12 Branch Point Sequence:

GGGTCCAGCAGG

Flanking Amino Acid:

FAALMPTILTCDLPHRLLQH

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

61.1

43.5

Major BPS

45.2

-0.3

1.1

46.6

Major PPT

71.5

0.48

0.8

65.1

30.5

Minor 5ss

35.5

-1.6

3.3

Minor BPS

36.7

-1.1

2.2

38.77

43.7

Associated Gene:

Gene:

ABCG4

Ensembl Gene ID:

ENSAPLG00000024795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026187

3750187 - 3761715

11529