Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3760977_3761052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3760977 - 3761052

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGATG

5'SS Class:

major

3'SS Sequence:

TGCTCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACAACAC

U12 Branch Point Sequence:

GGGGTGACAACA

Flanking Amino Acid:

AVELLRLLRQVRLRGRHPHH

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.5

42.7

Major BPS

45.9

-0.2

33.6

Major PPT

0.45

0.9

61.3

40.1

Minor 5ss

-2.4

3.4

38.2

Minor BPS

35.5

-1.1

2.2

41.45

39.2

Associated Gene:

Gene:

ABCG4

Ensembl Gene ID:

ENSAPLG00000024795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026187

3750187 - 3761715

11529