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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3764890_3765086_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3764890 - 3765086

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

GTGACCCCATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

ACGTTGTGACCC

Flanking Amino Acid:

GPYLRAASLPGAAGGSFHGK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

67.6

39.4

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

56.1

0.14

53.1

37.8

Minor 5ss

32.7

-2

39.6

45.9

Minor BPS

40.8

-0.7

2.2

48.39

41.9

Associated Gene:

Gene:

NLRX1

Ensembl Gene ID:

ENSAPLG00000014072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045938

3764808 - 3769506

4699

ENSAPLT00000014660

3764808 - 3769506

4699