Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3765398_3765486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3765398 - 3765486

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGTG

5'SS Class:

major

3'SS Sequence:

TTCTCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAA

U12 Branch Point Sequence:

CTCTTGCCAACG

Flanking Amino Acid:

LDHLRTVASSDAIKKHQKSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

64.9

41.1

Major BPS

0.07

1.4

64.5

42.8

Major PPT

0.63

0.7

69.8

Minor 5ss

34.6

-1.7

3.4

43.3

45.4

Minor BPS

39.7

-0.9

2.4

47.26

Associated Gene:

Gene:

NLRX1

Ensembl Gene ID:

ENSAPLG00000014072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014660

3764808 - 3769506

4699

ENSAPLT00000045938

3764808 - 3769506

4699