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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3766104_3766533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3766104 - 3766533

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGGC

5'SS Class:

major

3'SS Sequence:

CCTCCGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

CCCAGCTCACCC

Flanking Amino Acid:

NLLRKYLLPEASIIVTARPS

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.3

72.7

38.2

Major BPS

0.28

1.1

63.1

35.8

Major PPT

74.9

0.56

0.9

64.7

36.4

Minor 5ss

28.4

-2.5

35.8

40.9

Minor BPS

39.2

-0.8

2.1

42.44

44.9

Associated Gene:

Gene:

NLRX1

Ensembl Gene ID:

ENSAPLG00000014072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045938

3764808 - 3769506

4699

ENSAPLT00000014660

3764808 - 3769506

4699