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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3768712_3768816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3768712 - 3768816

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

GCTCCCTGAACA

Flanking Amino Acid:

LHAKCTVSDLRLSNNPVGVQ

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

65.2

0.34

0.9

57.7

33.3

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

65.9

0.49

1.5

71.01

40.5

Associated Gene:

Gene:

NLRX1

Ensembl Gene ID:

ENSAPLG00000014072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045938

3764808 - 3769506

4699

ENSAPLT00000014660

3764808 - 3769506

4699