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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3771085_3771177_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3771085 - 3771177

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTGTGCCCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATGGAT

U12 Branch Point Sequence:

AAGTGCTGGAGG

Flanking Amino Acid:

RFVDHLDHQRVVQRIKASGN

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

60.6

44.5

Major BPS

48.4

-0.1

1.5

49.1

46.3

Major PPT

0.07

1.7

58.5

43.1

Minor 5ss

38.7

-1.3

44.2

43.2

Minor BPS

40.8

-0.8

2.1

42.9

Associated Gene:

Gene:

PDZD3

Ensembl Gene ID:

ENSAPLG00000016510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035533

3768076 - 3773735

5660