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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3771365_3771449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3771365 - 3771449

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGAT

5'SS Class:

major

3'SS Sequence:

TCCCCTGGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CTGGCTCCATCC

Flanking Amino Acid:

GFGFSVSGPEGTKGLFQLSV

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.5

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

64.9

0.34

59.9

35.4

Minor 5ss

29.2

-2.4

3.8

49.3

Minor BPS

39.1

-0.8

46.47

Associated Gene:

Gene:

PDZD3

Ensembl Gene ID:

ENSAPLG00000016510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035533

3768076 - 3773735

5660

ENSAPLT00000047407

3769965 - 3775923

5959