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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3771587_3771658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3771587 - 3771658

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GGTTGTCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAT

U12 Branch Point Sequence:

TGGTGCTCAGCA

Flanking Amino Acid:

SCSRAQLARKLKQSGSKMTL

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

75.1

34.9

Major BPS

50.7

0.02

1.5

44.2

Major PPT

73.8

0.54

65.5

41.2

Minor 5ss

28.8

-2.4

3.3

41.4

45.1

Minor BPS

46.4

-0.2

2.2

60.46

45.2

Associated Gene:

Gene:

PDZD3

Ensembl Gene ID:

ENSAPLG00000016510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035533

3768076 - 3773735

5660