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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3771851_3771962_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3771851 - 3771962

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCGGGGGCG

5'SS Class:

major

3'SS Sequence:

TCCCCCCCGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGGGAT

U12 Branch Point Sequence:

GGGTCCAGCAGT

Flanking Amino Acid:

GFLLKEDDYGHLLSPVPAAA

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

58.6

37.6

Major BPS

45.5

-0.2

1.6

42.8

49.4

Major PPT

-0.1

1.7

57.8

33.2

Minor 5ss

11.9

-4.4

3.6

11.4

28.4

Minor BPS

39.6

-0.7

2.2

55.44

45.8

Associated Gene:

Gene:

PDZD3

Ensembl Gene ID:

ENSAPLG00000016510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047407

3769965 - 3775923

5959