Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3824769_3825671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3824769 - 3825671

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

GTCTCTGTAATT

Flanking Amino Acid:

GSTLSLDNQVSLNSGPPATS

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

29.8

-2.3

2.6

30.5

37.5

Minor BPS

58.1

0.33

75.88

41.7

Associated Gene:

Gene:

CBL

Ensembl Gene ID:

ENSAPLG00000013545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014166

3819403 - 3848923

29521