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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3856405_3856776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3856405 - 3856776

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCATCCCCATCC

Flanking Amino Acid:

PGEKGEMGPPGAPGPRGEPG

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

73.7

0.53

0.7

30.7

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

43.5

-0.5

2.1

52.13

44.8

Associated Gene:

Gene:

C1QTNF5

Ensembl Gene ID:

ENSAPLG00000030270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029298

3855858 - 3858740

2883