Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3864760_3864883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3864760 - 3864883

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCA

5'SS Class:

major

3'SS Sequence:

TCTCCACACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAC

U12 Branch Point Sequence:

TCCCCCTGAGCC

Flanking Amino Acid:

NSRMRTALMAEFAKLIQLLW

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

66.7

39.1

Major BPS

55.2

0.13

1.1

62.9

34.3

Major PPT

68.5

0.42

0.9

62.6

32.3

Minor 5ss

-1.7

3.5

47.9

47.8

Minor BPS

50.4

-0

1.8

60.78

44.2

Associated Gene:

Gene:

USP2

Ensembl Gene ID:

ENSAPLG00000030018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048281

3863937 - 3872534

8598

ENSAPLT00000021710

3863937 - 3873750

9814