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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3865008_3865292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3865008 - 3865292

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

LTGLRNLGNTCFMNSILQCL

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.3

0.7

73.7

31.3

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

USP2

Ensembl Gene ID:

ENSAPLG00000030018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048281

3863937 - 3872534

8598

ENSAPLT00000021710

3863937 - 3873750

9814