Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_3865344_3870369_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3865344 - 3870369

Intron Length:

5026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GTTGGCTCACCC

Flanking Amino Acid:

YGGTSAPDPLSSKAVQGLTG

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

68.8

42.2

Major BPS

52.1

0.05

1.3

41.8

Major PPT

77.5

0.62

0.7

71.6

26.5

Minor 5ss

33.2

-1.9

3.5

45.9

44.6

Minor BPS

44.3

-0.4

2.2

59.01

45.8

Associated Gene:

Gene:

USP2

Ensembl Gene ID:

ENSAPLG00000030018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048281

3863937 - 3872534

8598

ENSAPLT00000021710

3863937 - 3873750

9814