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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3871119_3872463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3871119 - 3872463

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

CGAAGCTGAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

32.3

Major BPS

58.2

0.2

1.1

49.1

Major PPT

86.3

0.82

0.7

81.2

23.9

Minor 5ss

40.7

-1

3.1

54.8

43.3

Minor BPS

46.6

-0.2

1.9

53.92

43.2

Associated Gene:

Gene:

USP2

Ensembl Gene ID:

ENSAPLG00000030018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021710

3863937 - 3873750

9814