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Intron Name: Anas_platyrhynchos_platyrhynchos_25_387425_390629_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

387425 - 390629

Intron Length:

3205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCAGGTAG

5'SS Class:

major

3'SS Sequence:

GCAGTGAGGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAA

U12 Branch Point Sequence:

CCCTGCCCAATG

Flanking Amino Acid:

TWNNTHISRVGAFLQPPSSL

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

59.2

42.2

Major BPS

49.1

-0

1.3

58.4

40.3

Major PPT

39.9

-0.5

1.7

35.4

44.5

Minor 5ss

31.6

-2.1

3.1

35.1

42.4

Minor BPS

39.2

-0.9

2.1

39.35

44.8

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024817

387240 - 396333

9094