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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3875731_3876331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3875731 - 3876331

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CCATGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TTGTCCCCATGC

Flanking Amino Acid:

KAGERQPDEQDLRSLRTRRN

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

65.4

0.35

0.9

57.9

32.9

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

43.1

-0.5

2.3

59.24

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036427

3875083 - 3877846

2764