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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3876358_3877208_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3876358 - 3877208

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

GGCCTGTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

NQIKNITVIKAGERQPDEQD

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.4

0.42

64.3

41.4

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036427

3875083 - 3877846

2764