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Intron Name: Anas_platyrhynchos_platyrhynchos_25_390742_390815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

390742 - 390815

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCACG

5'SS Class:

major

3'SS Sequence:

TGTTTGGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

GAGGCACTGATG

Flanking Amino Acid:

YYWLRHNTPEDAKVMSWWDY

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.2

66.3

45.2

Major BPS

71.2

0.53

37.5

Major PPT

71.1

0.47

1.1

65.2

45.5

Minor 5ss

45.2

-0.5

2.6

58.6

45.7

Minor BPS

39.4

-0.9

1.9

37.81

38.7

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655