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Intron Name: Anas_platyrhynchos_platyrhynchos_25_391005_391135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

391005 - 391135

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCTACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTTGCTCTACAA

Flanking Amino Acid:

QDSTYPIKNEVASGMILVMA

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

84.1

26.4

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

66.1

0.36

1.1

65.5

40.2

Minor 5ss

34.9

-1.7

3.4

49.4

41.3

Minor BPS

46.6

-0.2

2.1

64.85

41.7

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655