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Intron Name: Anas_platyrhynchos_platyrhynchos_25_391292_392034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

391292 - 392034

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGCT

5'SS Class:

major

3'SS Sequence:

CTGTTGCCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

CAGGTGTTGACT

Flanking Amino Acid:

VTSMYFSAVMVRLMLVLAPV

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

0.9

68.3

36.4

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

67.7

0.4

0.9

62.2

34.7

Minor 5ss

26.6

-2.7

3.5

35.6

42.2

Minor BPS

45.2

-0.2

2.1

58.44

45.3

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655