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Intron Name: Anas_platyrhynchos_platyrhynchos_25_392127_392306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

392127 - 392306

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

TCTTACCTATTT

Flanking Amino Acid:

DLQLLVFMFPVGLYYCFSNL

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

67.6

39.4

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

86.2

0.81

0.8

80.7

31.3

Minor 5ss

32.7

-2

39.6

45.9

Minor BPS

0.01

2.1

73.52

43.5

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655