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Intron Name: Anas_platyrhynchos_platyrhynchos_25_392463_393022_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

392463 - 393022

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCTGA

5'SS Class:

weak_major

3'SS Sequence:

TCCTCTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTGAC

U12 Branch Point Sequence:

TCGATCGTGACT

Flanking Amino Acid:

LTIGAVLMLTGKISPWTGRF

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

56.8

Major BPS

58.8

0.22

1.3

44.3

Major PPT

73.1

0.52

0.9

68.7

37.2

Minor 5ss

47.4

-0.3

64.8

46.5

Minor BPS

48.2

-0

2.1

66.71

44.6

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015976

390609 - 397263

6655

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094