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Intron Name: Anas_platyrhynchos_platyrhynchos_25_393204_394014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

393204 - 394014

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGAAC

5'SS Class:

major

3'SS Sequence:

CCCCTGCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TAGTATCTGATT

Flanking Amino Acid:

SMQISFVGFQPVLSSEHMAA

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

69.1

37.5

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

71.8

0.49

0.8

64.6

30.9

Minor 5ss

25.7

-2.8

3.2

32.5

42.8

Minor BPS

47.2

-0.1

1.8

65.19

39.7

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655

ENSAPLT00000038465

383126 - 395814

12689