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Intron Name: Anas_platyrhynchos_platyrhynchos_25_394180_394592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

394180 - 394592

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

AGCCCTGGAACT

Flanking Amino Acid:

AMCALAYFYMVSSWGGYVFL

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

0.72

0.9

37.2

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

45.1

-0.2

2.1

61.39

42.3

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655