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Intron Name: Anas_platyrhynchos_platyrhynchos_25_394700_395392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

394700 - 395392

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

CTTGCTTTGACC

Flanking Amino Acid:

RSVAGSYDNEGIAIFCMLLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

74.1

0.6

66.7

39.9

Major PPT

77.3

0.61

0.8

70.1

35.5

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

67.6

0.54

1.4

73.02

38.9

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655