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Intron Name: Anas_platyrhynchos_platyrhynchos_25_395484_395673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

395484 - 395673

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAA

U12 Branch Point Sequence:

GCTTTTCTACCC

Flanking Amino Acid:

VTYHLTKELKDAGAGLLAAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.7

40.1

Major BPS

65.4

0.38

1.1

67.5

Major PPT

73.9

0.54

65.1

45.5

Minor 5ss

34.7

-1.7

3.5

46.6

48.7

Minor BPS

47.2

-0.2

1.9

58.67

40.7

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038465

383126 - 395814

12689

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655