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Intron Name: Anas_platyrhynchos_platyrhynchos_25_395820_396260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

395820 - 396260

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GCTCTGCTGACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

68.8

43.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

71.8

0.49

0.9

64.8

36.6

Minor 5ss

37.2

-1.4

46.7

48.6

Minor BPS

40.2

-0.9

2.2

44.95

41.3

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024817

387240 - 396333

9094

ENSAPLT00000015976

390609 - 397263

6655