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Intron Name: Anas_platyrhynchos_platyrhynchos_25_396383_397234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

396383 - 397234

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

CTTGCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CTTGCTGTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.3

70.9

39.9

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

78.6

0.64

0.9

71.7

38.2

Minor 5ss

39.1

-1.2

3.3

57.1

40.8

Minor BPS

45.8

-0.3

2.3

62.29

44.3

Associated Gene:

Gene:

STT3A

Ensembl Gene ID:

ENSAPLG00000015299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015976

390609 - 397263

6655