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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3974716_3975082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3974716 - 3975082

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCTC

5'SS Class:

major

3'SS Sequence:

CCTCCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTCCCCTCACCC

Flanking Amino Acid:

KSHLTAEDIQVVHLDNMKHE

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.7

0.62

0.9

33.3

Minor 5ss

34.2

-1.8

3.6

50.1

46.4

Minor BPS

48.8

-0.1

1.9

59.94

45.2

Associated Gene:

Gene:

NECTIN1

Ensembl Gene ID:

ENSAPLG00000001931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002151

3963834 - 4004707

40874