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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3975171_3976430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3975171 - 3976430

Intron Length:

1260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

TCTTTACCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

ACTTCTTTACCT

Flanking Amino Acid:

QKNRTDADHDLIDLPPSHKP

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

71.2

40.3

Major BPS

0.6

65.6

41.1

Major PPT

83.9

0.76

0.8

78.2

29.4

Minor 5ss

34.9

-1.7

2.9

52.3

44.3

Minor BPS

69.2

0.68

1.6

81.74

40.3

Associated Gene:

Gene:

NECTIN1

Ensembl Gene ID:

ENSAPLG00000001931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002151

3963834 - 4004707

40874