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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3976579_4000016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3976579 - 4000016

Intron Length:

23438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CTGTGCTTCGCT

Flanking Amino Acid:

RSGLVEVNVTDKPLPQGAPG

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

72.3

0.55

73.3

28.9

Major PPT

75.1

0.56

68.6

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

38.1

-0.8

3.7

67.12

49.4

Associated Gene:

Gene:

NECTIN1

Ensembl Gene ID:

ENSAPLG00000001931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002151

3963834 - 4004707

40874