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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4000169_4003112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4000169 - 4003112

Intron Length:

2944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TATTCTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATGGTTTTATTC

Flanking Amino Acid:

NPPAHTYEWKLPNGTLPGSV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

74.4

0.55

0.8

66.9

35.1

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

48.1

-0.1

1.6

55.11

38.3

Associated Gene:

Gene:

NECTIN1

Ensembl Gene ID:

ENSAPLG00000001931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001962

3976578 - 4004707

28130

ENSAPLT00000038430

3991510 - 4004880

13371

ENSAPLT00000002151

3963834 - 4004707

40874