Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_4211690_4215265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4211690 - 4215265

Intron Length:

3576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAGTAT

5'SS Class:

major

3'SS Sequence:

TCTGCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TCCCTCTCAAGG

Flanking Amino Acid:

NFIERNHMENGDHRFMMNNY

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

69.3

37.7

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

75.3

0.57

0.8

69.4

31.2

Minor 5ss

38.2

-1.3

3.5

55.6

48.7

Minor BPS

45.8

-0.4

1.9

48.07

45.5

Associated Gene:

Gene:

TRIM29

Ensembl Gene ID:

ENSAPLG00000000965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023893

4203005 - 4225771

22767

ENSAPLT00000000957

4203005 - 4225771

22767