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Intron Name: Anas_platyrhynchos_platyrhynchos_25_424691_424879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

424691 - 424879

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAC

U12 Branch Point Sequence:

CCATTCACACCT

Flanking Amino Acid:

EKVIQNTSKPSTKKGGLGGM

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

67.8

0.44

30.1

Major PPT

82.6

0.73

0.8

77.1

31.6

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

42.6

-0.4

57.18

45.4

Associated Gene:

Gene:

SRPRA

Ensembl Gene ID:

ENSAPLG00000016079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016787

418244 - 427730

9487