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Intron Name: Anas_platyrhynchos_platyrhynchos_25_425420_425773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

425420 - 425773

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TCCTTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTCTCTTTATAT

Flanking Amino Acid:

LEGKVMGTFTTVTSTVKQAL

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

64.6

40.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

85.8

0.81

0.7

79.5

32.5

Minor 5ss

35.2

-1.7

3.3

49.2

41.2

Minor BPS

0.52

1.7

80.79

41.2

Associated Gene:

Gene:

SRPRA

Ensembl Gene ID:

ENSAPLG00000016079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016787

418244 - 427730

9487