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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4260943_4265232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4260943 - 4265232

Intron Length:

4290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

VKKHNPLRVREVKIFRALIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

68.8

43.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.2

0.48

0.9

64.7

36.5

Minor 5ss

33.1

-1.9

2.8

41.8

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

OAF

Ensembl Gene ID:

ENSAPLG00000000725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040546

4260664 - 4267275

6612