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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4272098_4276685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4272098 - 4276685

Intron Length:

4588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGGC

5'SS Class:

major

3'SS Sequence:

CCATCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGTTATTAAAAT

Flanking Amino Acid:

RMVNLESVHAEIKMSGDAAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.2

39.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

80.6

0.69

0.8

72.3

37.5

Minor 5ss

28.9

-2.4

3.6

41.1

45.6

Minor BPS

52.2

0.15

1.9

74.96

41.5

Associated Gene:

Gene:

POU2F3

Ensembl Gene ID:

ENSAPLG00000015548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016217

4271812 - 4311324

39513