Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_429978_430593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

429978 - 430593

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGGG

5'SS Class:

major

3'SS Sequence:

TGCTCCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TGGTACTTACAC

Flanking Amino Acid:

TTEIAMRGRTGVLKEGQQLN

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

52.2

44.9

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

73.5

0.53

0.8

70.6

34.8

Minor 5ss

26.9

-2.7

3.7

37.8

Minor BPS

49.2

-0

1.9

61.54

43.2

Associated Gene:

Gene:

FAM118B

Ensembl Gene ID:

ENSAPLG00000001146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040287

427961 - 441163

13203

ENSAPLT00000035144

423861 - 436390

12530

ENSAPLT00000001207

429593 - 441163

11571