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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4302553_4304080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4302553 - 4304080

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TTTTTCCCATAG

Flanking Amino Acid:

SMMPGSQIAGDMSSLHTLQQ

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

80.9

0.69

0.7

76.9

25.4

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

43.6

-0.6

2.1

57.48

43.7

Associated Gene:

Gene:

POU2F3

Ensembl Gene ID:

ENSAPLG00000015548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022371

4271812 - 4311324

39513

ENSAPLT00000016217

4271812 - 4311324

39513