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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4307455_4307804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4307455 - 4307804

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ATGTTATGATTT

Flanking Amino Acid:

QRRIKLGFTQGDVGLAMGKL

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

84.6

0.86

41.2

Major PPT

79.5

0.66

0.9

76.8

31.8

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

45.6

-0.2

1.9

63.92

40.7

Associated Gene:

Gene:

POU2F3

Ensembl Gene ID:

ENSAPLG00000015548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016217

4271812 - 4311324

39513

ENSAPLT00000022371

4271812 - 4311324

39513