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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4321559_4322129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4321559 - 4322129

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

ACGTCTTTCATT

Flanking Amino Acid:

LDGPWPLTHAGSPNTPLQIH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

79.5

0.73

0.9

36.9

Major PPT

87.7

0.85

0.7

85.6

27.4

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

56.1

0.27

1.7

69.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020669

4321359 - 4324223

2865