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Intron Name: Anas_platyrhynchos_platyrhynchos_25_43609_45650_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
43609 - 45650

Intron Length:
2042

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTTTG

5'SS Class:
major

3'SS Sequence:
TTTAAATCTTAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
CTTTTTTTAAAT

Flanking Amino Acid:
IAERNLHSYKRSEQSESSET

Intron Amino Acid Position:
364

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.1
72.6
39.2

Major BPS
100
1.24
0.5
100
0

Major PPT
67.2
0.39
1.1
69.5
40.6

Minor 5ss
46.3
-0.4
2.4
58.6
46

Minor BPS
72.6
0.79
1.3
84.29
36.6

Associated Gene:

Gene:
ANKMY1

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6941 - 53344
46404