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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4382693_4383523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4382693 - 4383523

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCATATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCTCTCATATCC

Flanking Amino Acid:

GVQTGDRIIKVNGTLVTHSN

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

70.9

0.47

0.9

61.8

38.9

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

49.2

-0

1.9

64.27

41.2

Associated Gene:

Gene:

ARHGEF12

Ensembl Gene ID:

ENSAPLG00000014925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015657

4343160 - 4568695

225536

ENSAPLT00000046653

4343160 - 4485049

141890

ENSAPLT00000034405

4343160 - 4413370

70211

ENSAPLT00000023751

4343160 - 4413370

70211