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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4384447_4385076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4384447 - 4385076

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTATTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

GAACCCTTAATT

Flanking Amino Acid:

ERITSPVLMGEENNIVHNQK

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.8

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

73.4

0.53

0.9

65.1

40.9

Minor 5ss

40.1

-1.1

3.1

49.7

46.1

Minor BPS

71.6

0.76

1.2

77.02

38.8

Associated Gene:

Gene:

ARHGEF12

Ensembl Gene ID:

ENSAPLG00000014925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015657

4343160 - 4568695

225536

ENSAPLT00000046653

4343160 - 4485049

141890

ENSAPLT00000034405

4343160 - 4413370

70211

ENSAPLT00000023751

4343160 - 4413370

70211