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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4389524_4390013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4389524 - 4390013

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TATCCCTTAATT

Flanking Amino Acid:

VVSQFDPAALLCYLYTDLYK

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

74.2

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

80.9

0.7

75.9

26.4

Minor 5ss

39.8

-1.1

3.1

53.4

45.6

Minor BPS

83.3

1.12

91.11

31.6

Associated Gene:

Gene:

ARHGEF12

Ensembl Gene ID:

ENSAPLG00000014925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046653

4343160 - 4485049

141890

ENSAPLT00000034405

4343160 - 4413370

70211

ENSAPLT00000023751

4343160 - 4413370

70211

ENSAPLT00000015657

4343160 - 4568695

225536