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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4391290_4392105_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4391290 - 4392105

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGTT

5'SS Class:

major

3'SS Sequence:

CTCTGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TCTCTCTGTATT

Flanking Amino Acid:

PEVQRNLEDFRQKRSMGLTL

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.1

78.9

35.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

80.1

0.68

0.9

77.1

35.8

Minor 5ss

41.9

-0.9

3.5

64.8

46.5

Minor BPS

49.3

0.03

1.8

69.52

41.4

Associated Gene:

Gene:

ARHGEF12

Ensembl Gene ID:

ENSAPLG00000014925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015657

4343160 - 4568695

225536

ENSAPLT00000046653

4343160 - 4485049

141890

ENSAPLT00000034405

4343160 - 4413370

70211

ENSAPLT00000023751

4343160 - 4413370

70211