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Intron Name: Anas_platyrhynchos_platyrhynchos_25_439384_441079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

439384 - 441079

Intron Length:

1696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCGCTAT

U12 Branch Point Sequence:

TGTTCCGCTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

43.6

-0.4

1.4

35.8

41.3

Major PPT

80.7

0.69

0.8

78.4

35.6

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

46.5

-0.1

2.4

73.05

43.8

Associated Gene:

Gene:

FAM118B

Ensembl Gene ID:

ENSAPLG00000001146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001207

429593 - 441163

11571