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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4395698_4396322_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4395698 - 4396322

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTAATCTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATC

Flanking Amino Acid:

VDMGTPKPFRKMDSVGFADV

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.2

0.57

0.8

73.9

36.4

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

68.9

0.57

1.2

36.1

Associated Gene:

Gene:

ARHGEF12

Ensembl Gene ID:

ENSAPLG00000014925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023751

4343160 - 4413370

70211

ENSAPLT00000015657

4343160 - 4568695

225536

ENSAPLT00000046653

4343160 - 4485049

141890

ENSAPLT00000034405

4343160 - 4413370

70211